Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015819994.1_cds_XP_016500231.1_14081
CDS Infomation

[gene=LOC107818712] [db_xref=GeneID:107818712] [protein=probable E3 ubiquitin-protein ligase ARI8] [protein_id=XP_016500231.1] [location=complement(169576..171111)] [gbkey=CDS]
Sequence

ATGGAGTCCGACGGCGACATGTACGAGGACAGTGACGTAGAATCCGCCGGCGATGATTTC
TACGGCGACGGAGACGCTTCCGACGGCGTCAGCGACGCCGATGACGACGATTTCATTGGT
AATGATCCTGATGACTCCGATGATCTTTGCGCTAAGAAAAACTACGTCGTTTTGTCCGAC
GATGATATTCGTCGTCTCATGGACGATGATATCTCTAAGGTTTTCTCAGTTCTCTCAATT
TCCAAAATTGAAGCATCTGCTTTGCTCCGACGGTATAATTGGAGTGTGAGTAAAGTTCAC
GAGGAATGGTTCGCTGATGAATCGAAAGTTCGAGAAGCTATTGGCTTGAAAATAAATAAT
AAAATCATTCAATCTCCGGAATTAAATTCAGTAATTTGTGTAATTTGCTTTGAGGATTAT
TCATCCGATGGAATTTTGGCGTCTGCTTGTGGTCATCCTTTTTGCGTTGAATGTTGGCGA
GGGTATATTAGTAATTCCCTATCTGATGGTTCTGGATGTTTAAATTTGCGATGTCCTGAA
CCATCTTGTAAAGTTGCTGTCACACAGGATATGATCGATCTTTTAGCATCCGATGTTGAT
AAAAAGAAGTATTATGGATTTCTTTTTCGTTCTTACGTTGAGCAAAACAGGAAAATTAAG
TGGTGTCCTGCTCCGGGATGTAATTTCGCCGTTGAATTTGATATAGGGAGTGATAATTGC
GATGTTATGTGTAACTGTTCACATTGTTTTTGTTGGAATTGTACGGATGAAGCTCATCGA
CCCGTTAATTGTGAAACAGTGAGGAAATGGAAGGAGAAGAACAGAGCAGAATCGGAAAAT
ACTAATTGGATTTTGGCTTACACAAAACCTTGTCCCAAATGCAAACGCCCAATTGAAAAG
AACGAAGGGTGTATGCGAATGACATGTAGAGACCCTTGCAAGTATCAGTTTTGTTGGCTG
TGCCTTAATTCTTGGTCAACTCATGGCTATAATCCGTGTAACAAGTACAAGCCGGAGACT
GAAGATGAGAAAAAGAAAGAAATGGCAAGGCAATCTATTGTGAAATACACGCATTATTAC
GAGAGATGGGCTGCAAATGAGAAGTCGAGGCGAAAAGCTGTAGAGGATTTGAGGAGAATG
GATGAAGTGAATGTTAAGGAGCTGAGTAAATTGCAGAGAATCCCAGAGACACAATTGAAG
TTCATTTTAGATGCTTGGAATCAGATTGTTGAGTGTAGGAGAGTGTTAAAATGGACTTAT
GCTTATGGATTTTACTTTCCTAATGAGGAGCAAACGAAAAGGCGGTTTTTCGAGTACTTG
CAAGGACAGGCAGAAACTGGTTTGGAGAGACTTCACCATTGTGCAGAGAAGGAACTGGAG
ATTTATTTGAATGTTGAAGAAAGTGATTCCAAAGCATTTTATGATTTCCGTAGAAAGCTT
ACGGGTTTGACTAGTGTGACTAAGAATTACTTTGAGAATTTAGTTAGAGCACTTGAGAAT
GGTCTTGAAGATGTGGATTCTCTTAATGCAAAATAA

Peptide Sequence

PEP ID

XP_016500231.1
PEP Infomation

PREDICTED: probable E3 ubiquitin-protein ligase ARI8 [Nicotiana tabacum]
Sequence

MESDGDMYEDSDVESAGDDFYGDGDASDGVSDADDDDFIGNDPDDSDDLCAKKNYVVLSD
DDIRRLMDDDISKVFSVLSISKIEASALLRRYNWSVSKVHEEWFADESKVREAIGLKINN
KIIQSPELNSVICVICFEDYSSDGILASACGHPFCVECWRGYISNSLSDGSGCLNLRCPE
PSCKVAVTQDMIDLLASDVDKKKYYGFLFRSYVEQNRKIKWCPAPGCNFAVEFDIGSDNC
DVMCNCSHCFCWNCTDEAHRPVNCETVRKWKEKNRAESENTNWILAYTKPCPKCKRPIEK
NEGCMRMTCRDPCKYQFCWLCLNSWSTHGYNPCNKYKPETEDEKKKEMARQSIVKYTHYY
ERWAANEKSRRKAVEDLRRMDEVNVKELSKLQRIPETQLKFILDAWNQIVECRRVLKWTY
AYGFYFPNEEQTKRRFFEYLQGQAETGLERLHHCAEKELEIYLNVEESDSKAFYDFRRKL
TGLTSVTKNYFENLVRALENGLEDVDSLNAK

Transcript Sequence

Gene sequence data has not been registered.